LocalFree

PubChem Finder MCP server

MysterionRise/pubchem-finder

Search PubChem by structure: a local similarity/substructure index, live PubChem data, RDKit tools

9 GitHub stars3 forks

Install PubChem Finder in Claude Code

Claude Code
claude mcp add pubchem-finder -- uvx pubchem-finder
mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)
{
  "mcpServers": {
    "pubchem-finder": {
      "command": "uvx",
      "args": [
        "pubchem-finder"
      ]
    }
  }
}

Frequently asked questions

What does the PubChem Finder MCP server do?

Search PubChem by structure: a local similarity/substructure index, live PubChem data, RDKit tools

Is the PubChem Finder MCP server free?

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Does PubChem Finder run locally or remotely?

Local. Runs on your machine (stdio). You install it with npx, uvx, Docker or from source.

How do I add PubChem Finder to Claude Code?

Run: claude mcp add pubchem-finder -- uvx pubchem-finder

More search & web scraping MCP servers

View all