Myvariant MCP Server: Install & Setup

Install Myvariant in Claude Code

Remote URL

Claude Code

claude mcp add --transport http pipeworx-io-myvariant https://gateway.pipeworx.io/myvariant/mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "pipeworx-io-myvariant": {
      "url": "https://gateway.pipeworx.io/myvariant/mcp"
    }
  }
}

npm

Claude Code

claude mcp add pipeworx-io-myvariant -- npx -y @pipeworx/mcp-myvariant

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "pipeworx-io-myvariant": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-myvariant"
      ]
    }
  }
}

Frequently asked questions

What does the Myvariant MCP server do?

MyVariant.info MCP. Aggregated human genetic-variant annotation: dbSNP, ClinVar clinical…

Is the Myvariant MCP server free?

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Does Myvariant run locally or remotely?

Local + Remote. Can run locally or be used as a hosted remote server.

How do I add Myvariant to Claude Code?

Run: claude mcp add --transport http pipeworx-io-myvariant https://gateway.pipeworx.io/myvariant/mcp

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