Interpro MCP Server: Install & Setup

Install Interpro in Claude Code

Remote URL

Claude Code

claude mcp add --transport http pipeworx-io-interpro https://gateway.pipeworx.io/interpro/mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "pipeworx-io-interpro": {
      "url": "https://gateway.pipeworx.io/interpro/mcp"
    }
  }
}

npm

Claude Code

claude mcp add pipeworx-io-interpro -- npx -y @pipeworx/mcp-interpro

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "pipeworx-io-interpro": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-interpro"
      ]
    }
  }
}

Frequently asked questions

What does the Interpro MCP server do?

InterPro MCP (EBI) — protein family / domain / functional-site classification.

Is the Interpro MCP server free?

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Does Interpro run locally or remotely?

Local + Remote. Can run locally or be used as a hosted remote server.

How do I add Interpro to Claude Code?

Run: claude mcp add --transport http pipeworx-io-interpro https://gateway.pipeworx.io/interpro/mcp

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