Gwas Catalog MCP Server: Install & Setup

Install Gwas Catalog in Claude Code

Remote URL

Claude Code

claude mcp add --transport http gwas-catalog https://gateway.pipeworx.io/gwas-catalog/mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gwas-catalog": {
      "url": "https://gateway.pipeworx.io/gwas-catalog/mcp"
    }
  }
}

npm

Claude Code

claude mcp add gwas-catalog -- npx -y @pipeworx/mcp-gwas-catalog

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gwas-catalog": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-gwas-catalog"
      ]
    }
  }
}

Frequently asked questions

What does the Gwas Catalog MCP server do?

GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies. Look up a SNP…

Is the Gwas Catalog MCP server free?

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Does Gwas Catalog run locally or remotely?

Local + Remote. Can run locally or be used as a hosted remote server.

How do I add Gwas Catalog to Claude Code?

Run: claude mcp add --transport http gwas-catalog https://gateway.pipeworx.io/gwas-catalog/mcp

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