Gprofiler MCP Server: Install & Setup

Install Gprofiler in Claude Code

Claude Code

claude mcp add --transport http gprofiler https://gateway.pipeworx.io/gprofiler/mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gprofiler": {
      "url": "https://gateway.pipeworx.io/gprofiler/mcp"
    }
  }
}

Claude Code

claude mcp add gprofiler -- npx -y @pipeworx/mcp-gprofiler

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gprofiler": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-gprofiler"
      ]
    }
  }
}

g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Local + Remote. Can run locally or be used as a hosted remote server.

Run: claude mcp add --transport http gprofiler https://gateway.pipeworx.io/gprofiler/mcp

ianderso/gramps-evidence-mcp

Read/write a self-hosted Gramps Web family tree where every fact carries a citation.

governmyai/mcp-server

AI compliance obligations across EU AI Act, ISO 42001, Colorado AI Act, NIST, HIPAA, SOX, FTC

pipeworx-io/mcp-grantconnect-au

GrantConnect (Australia) MCP — Commonwealth grant opportunities and grants awarded, from…

icohangar-ops/governed-mcp-gateway

HTTP MCP gateway: principal on tools/call + SSE, allowlists, vault rotate, CHP gates.

fhs1220888/Groundline

Verifiable test-data analysis: deterministic tools, evidence ledger, number-level checks.

org.p31ca/govern

P31 governance: validate constitutions, prove gates fail, compose specs, reconcile timelines.