Gnomad Genetics MCP Server: Install & Setup

Install Gnomad Genetics in Claude Code

Remote URL

Claude Code

claude mcp add --transport http gnomad-genetics https://gnomad-genetics.caseyjhand.com/mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gnomad-genetics": {
      "url": "https://gnomad-genetics.caseyjhand.com/mcp"
    }
  }
}

npm

Claude Code

claude mcp add gnomad-genetics -- npx -y @cyanheads/gnomad-genetics-mcp-server

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gnomad-genetics": {
      "command": "npx",
      "args": [
        "-y",
        "@cyanheads/gnomad-genetics-mcp-server"
      ]
    }
  }
}

Frequently asked questions

What does the Gnomad Genetics MCP server do?

Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.

Is the Gnomad Genetics MCP server free?

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Does Gnomad Genetics run locally or remotely?

Local + Remote. Can run locally or be used as a hosted remote server.

How do I add Gnomad Genetics to Claude Code?

Run: claude mcp add --transport http gnomad-genetics https://gnomad-genetics.caseyjhand.com/mcp

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