Gnomad MCP Server: Install & Setup

Install Gnomad in Claude Code

Remote URL

Claude Code

claude mcp add --transport http gnomad https://gateway.pipeworx.io/gnomad/mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gnomad": {
      "url": "https://gateway.pipeworx.io/gnomad/mcp"
    }
  }
}

npm

Claude Code

claude mcp add gnomad -- npx -y @pipeworx/mcp-gnomad

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "gnomad": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-gnomad"
      ]
    }
  }
}

Frequently asked questions

What does the Gnomad MCP server do?

gnomAD MCP — Broad Institute Genome Aggregation Database (GraphQL).

Is the Gnomad MCP server free?

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Does Gnomad run locally or remotely?

Local + Remote. Can run locally or be used as a hosted remote server.

How do I add Gnomad to Claude Code?

Run: claude mcp add --transport http gnomad https://gateway.pipeworx.io/gnomad/mcp

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