Clinvar MCP Server: Install & Setup

Install Clinvar in Claude Code

Claude Code

claude mcp add clinvar -- npx -y clinvar-mcp

mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)

{
  "mcpServers": {
    "clinvar": {
      "command": "npx",
      "args": [
        "-y",
        "clinvar-mcp"
      ]
    }
  }
}

Clinical variants from ClinVar. No key required.

Yes, most likely. Open source and no paid account or API key is mentioned in the listing. Check the provider for current pricing.

Local. Runs on your machine (stdio). You install it with npx, uvx, Docker or from source.

Run: claude mcp add clinvar -- npx -y clinvar-mcp

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