LocalFree server, account needed

AlphaFold Sovereign MCP server

smaniches/alphafold-sovereign-mcp

AlphaFold DB and other public biomedical sources in a local SQLite knowledge graph for structure confidence, variants, diseases, drug targets and orthology.

4 GitHub stars2 forks
Source code

Install AlphaFold Sovereign in Claude Code

Claude Code
claude mcp add alphafold-sovereign -- uvx alphafold-sovereign-mcp
mcp.json (Claude Desktop, Cursor, VS Code, Windsurf)
{
  "mcpServers": {
    "alphafold-sovereign": {
      "command": "uvx",
      "args": [
        "alphafold-sovereign-mcp"
      ]
    }
  }
}

Frequently asked questions

What does the AlphaFold Sovereign MCP server do?

AlphaFold DB and other public biomedical sources in a local SQLite knowledge graph for structure confidence, variants, diseases, drug targets and orthology.

Is the AlphaFold Sovereign MCP server free?

The server is free, but you will likely need an account. The server itself is free, but it connects to a service that needs an account or API key, which may have paid tiers. Check the provider for current pricing.

Does AlphaFold Sovereign run locally or remotely?

Local. Runs on your machine (stdio). You install it with npx, uvx, Docker or from source.

How do I add AlphaFold Sovereign to Claude Code?

Run: claude mcp add alphafold-sovereign -- uvx alphafold-sovereign-mcp

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